Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 AL049597.2-201ENST00000565575 961 ntBASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HS3ST3A1Q9Y663 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 LIN28AP1-201ENST00000429574 405 ntBASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 ECEL1P2-202ENST00000465689 757 ntBASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 AL590326.2-201ENST00000625139 305 ntBASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HS3ST3A1Q9Y663 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 SLC25A1P2-201ENST00000430693 912 ntBASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 KRT18P57-201ENST00000443599 1254 ntBASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 AC116562.4-202ENST00000641738 218 ntBASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HS3ST3A1Q9Y663 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 CCR12P-201ENST00000446203 998 ntBASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HS3ST3A1Q9Y663 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HS3ST3A1Q9Y663 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HS3ST3A1Q9Y663 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HS3ST3A1Q9Y663 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 ATP5G1P1-201ENST00000448724 379 ntBASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HS3ST3A1Q9Y663 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms