Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 AC124016.1-201ENST00000609552 612 ntBASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 AC026471.1-201ENST00000564629 3026 ntBASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 AL135905.2-201ENST00000584934 1404 ntBASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 AC006557.6-201ENST00000623071 864 ntBASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB6Q9Y5F9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 AC239809.2-201ENST00000415381 517 ntBASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 Z99916.2-201ENST00000604037 246 ntBASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 AP001412.1-201ENST00000608405 714 ntBASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 AC110285.5-201ENST00000611501 352 ntBASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 AC116562.4-201ENST00000641316 2276 ntBASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGB6Q9Y5F9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGB6Q9Y5F9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms