Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC087499.1-201ENST00000418141 1075 ntBASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 AL121906.2-201ENST00000621597 723 ntBASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 AC124283.5-201ENST00000624661 1809 ntBASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB11Q9Y5F2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB11Q9Y5F2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PCDHB11Q9Y5F2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB11Q9Y5F2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 AL691432.2-201ENST00000607222 2038 ntBASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB11Q9Y5F2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 AC007952.6-201ENST00000573168 2673 ntBASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 AC003957.1-201ENST00000625108 2673 ntBASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 AC116351.2-201ENST00000606540 1585 ntBASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB11Q9Y5F2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 AL355355.2-201ENST00000442321 338 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms