Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 KRT16P1-201ENST00000399124 1418 ntBASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 PCDHAC2-203ENST00000615316 3011 ntBASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 RBM17P1-201ENST00000453646 1190 ntBASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB2Q9Y5E7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 MMP23A-201ENST00000234610 1017 ntBASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 KRT18P16-201ENST00000510337 1294 ntBASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB2Q9Y5E7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 FAM210CP-201ENST00000445714 574 ntBASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 AC012306.2-201ENST00000609350 630 ntBASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 AC097493.4-201ENST00000641197 219 ntBASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB2Q9Y5E7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 AC079598.2-202ENST00000546624 1451 ntBASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDHB2Q9Y5E7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 TUBB8P6-201ENST00000436895 1288 ntBASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 AC116562.2-201ENST00000507042 360 ntBASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB2Q9Y5E7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 AL691432.2-201ENST00000607222 2038 ntBASIC21.38■■□□□ 1.01
PCDHB2Q9Y5E7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms