Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 KRT18P22-201ENST00000402024 1347 ntBASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 TMPOP1-202ENST00000424642 1267 ntBASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTDP1Q9Y5B0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 AC004980.1-204ENST00000429707 299 ntBASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 TMEM179-206ENST00000616017 1645 ntBASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.59■■□□□ 1.21
CTDP1Q9Y5B0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 B3GAT3P1-201ENST00000471720 806 ntBASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.58■■□□□ 1.21
CTDP1Q9Y5B0 AP001271.2-201ENST00000624018 1556 ntBASIC22.58■■□□□ 1.2
CTDP1Q9Y5B0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
CTDP1Q9Y5B0 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 CRYGFP-201ENST00000418459 633 ntBASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 AC097488.1-201ENST00000507834 756 ntBASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 C2orf69P3-201ENST00000565542 1120 ntBASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 DGCR10-201ENST00000609839 495 ntBASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 CYP2D8P-201ENST00000433633 1490 ntBASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTDP1Q9Y5B0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 RN7SL850P-201ENST00000579959 291 ntBASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.56■■□□□ 1.2
CTDP1Q9Y5B0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 HCG11-201ENST00000411553 5696 ntBASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 AC011506.1-201ENST00000474329 610 ntBASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 SLC25A1P4-201ENST00000567977 778 ntBASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 KRT8P8-201ENST00000434750 1448 ntBASIC22.55■■□□□ 1.2
CTDP1Q9Y5B0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms