Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 AC020763.4-201ENST00000623414 4170 ntBASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D4Q9Y2X8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D4Q9Y2X8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 RARRES2P4-201ENST00000514074 484 ntBASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D4Q9Y2X8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms