Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN2Q9UHD9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN2Q9UHD9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN2Q9UHD9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 AC099791.1-201ENST00000416440 715 ntBASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 AL034346.1-201ENST00000568244 1277 ntBASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 AL031602.1-201ENST00000633169 911 ntBASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
UBQLN2Q9UHD9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 AC027682.1-201ENST00000562846 899 ntBASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 AC126544.1-201ENST00000580842 1059 ntBASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN2Q9UHD9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
UBQLN2Q9UHD9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBQLN2Q9UHD9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
UBQLN2Q9UHD9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
UBQLN2Q9UHD9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 AC233992.3-201ENST00000607491 485 ntBASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 AL136967.2-201ENST00000623968 743 ntBASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 AL139384.1-201ENST00000612143 3047 ntBASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN2Q9UHD9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 MIR939-201ENST00000401314 82 ntBASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 BX842568.3-201ENST00000418104 571 ntBASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 SUDS3P1-201ENST00000505831 966 ntBASIC16.44■□□□□ 0.22
UBQLN2Q9UHD9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms