Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RN7SL510P-201ENST00000581311 263 ntBASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 AC092119.3-201ENST00000612618 583 ntBASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 NPAP1P7-201ENST00000613027 823 ntBASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 LINC01311-201ENST00000565162 1445 ntBASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.04■□□□□ 0.96
CXXC1Q9P0U4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 GCSHP2-201ENST00000560971 527 ntBASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 LINC01465-201ENST00000408887 1940 ntBASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.03■□□□□ 0.96
CXXC1Q9P0U4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 STARP1-201ENST00000397973 869 ntBASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 SPDYE13P-201ENST00000445314 798 ntBASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 CKBP1-201ENST00000565489 1086 ntBASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 AL160286.2-201ENST00000567150 934 ntBASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 KRT8P8-201ENST00000434750 1448 ntBASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CXXC1Q9P0U4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CXXC1Q9P0U4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 SPDYE15P-201ENST00000424157 909 ntBASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 AC006538.3-201ENST00000612495 578 ntBASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
CXXC1Q9P0U4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXXC1Q9P0U4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXXC1Q9P0U4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21■□□□□ 0.95
CXXC1Q9P0U4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms