Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN4Q9NRR5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 MIR4651-201ENST00000582622 73 ntBASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.98■□□□□ 0.47
UBQLN4Q9NRR5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 KRT18P16-201ENST00000510337 1294 ntBASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 AC233263.1-201ENST00000578059 224 ntBASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN4Q9NRR5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 NBPF21P-201ENST00000425093 1451 ntBASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 TUBB8P6-201ENST00000436895 1288 ntBASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 FAM201B-201ENST00000458407 597 ntBASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 AC073648.6-201ENST00000641589 218 ntBASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN4Q9NRR5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.96■□□□□ 0.46
UBQLN4Q9NRR5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN4Q9NRR5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN4Q9NRR5 AC128676.1-201ENST00000454392 318 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms