Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 AL031133.1-201ENST00000406807 723 ntBASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 AC128688.1-201ENST00000487626 519 ntBASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 C1QL1P1-201ENST00000568105 661 ntBASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 AL445675.2-201ENST00000620291 557 ntBASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 PHGDH-210ENST00000641115 1638 ntBASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 AC099778.1-201ENST00000568593 1911 ntBASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM7Q9NR12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM7Q9NR12 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AL691432.2-201ENST00000607222 2038 ntBASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AL391422.3-201ENST00000603791 2761 ntBASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AC009947.2-201ENST00000444014 672 ntBASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AC011506.1-201ENST00000474329 610 ntBASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AC091390.4-202ENST00000476426 537 ntBASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDLIM7Q9NR12 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 AC097488.1-201ENST00000507834 756 ntBASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PDLIM7Q9NR12 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 KRT18P48-201ENST00000434763 852 ntBASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.9■■□□□ 1.1
PDLIM7Q9NR12 AC139887.4-201ENST00000607877 719 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms