Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 RPS2P55-201ENST00000397318 883 ntBASIC23.09■■□□□ 1.29
RNF41Q9H4P4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AP002982.1-201ENST00000492365 877 ntBASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AC107956.1-201ENST00000494359 873 ntBASIC23.09■■□□□ 1.29
RNF41Q9H4P4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AP001412.1-201ENST00000608405 714 ntBASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AC066615.1-201ENST00000640911 628 ntBASIC23.09■■□□□ 1.29
RNF41Q9H4P4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF41Q9H4P4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 AF186192.3-201ENST00000583427 947 ntBASIC23.08■■□□□ 1.29
RNF41Q9H4P4 AC233702.5-201ENST00000584107 538 ntBASIC23.08■■□□□ 1.29
RNF41Q9H4P4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF41Q9H4P4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNF41Q9H4P4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
RNF41Q9H4P4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.08■■□□□ 1.28
RNF41Q9H4P4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.08■■□□□ 1.28
RNF41Q9H4P4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF41Q9H4P4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 NIFKP9-201ENST00000419265 221 ntBASIC23.06■■□□□ 1.28
RNF41Q9H4P4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 Z99916.2-201ENST00000604037 246 ntBASIC23.06■■□□□ 1.28
RNF41Q9H4P4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
RNF41Q9H4P4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 AC073195.1-201ENST00000607241 877 ntBASIC23.05■■□□□ 1.28
RNF41Q9H4P4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms