Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 FITM1-202ENST00000559294 800 ntBASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 NAPSB-206ENST00000562112 1266 ntBASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 AC005363.2-201ENST00000618631 242 ntBASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 LINC01568-207ENST00000641790 1380 ntBASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.53■□□□□ 0.88
ATXN3LQ9H3M9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 FSCN1P1-201ENST00000568912 1481 ntBASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 TMPOP1-202ENST00000424642 1267 ntBASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 RN7SL850P-201ENST00000579959 291 ntBASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3LQ9H3M9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN3LQ9H3M9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN3LQ9H3M9 AC112907.3-201ENST00000577781 2400 ntBASIC20.52■□□□□ 0.87
ATXN3LQ9H3M9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN3LQ9H3M9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN3LQ9H3M9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 CYP2D8P-201ENST00000433633 1490 ntBASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3LQ9H3M9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 AC026271.3-201ENST00000571884 352 ntBASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN3LQ9H3M9 AC131212.4-201ENST00000623606 975 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms