Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 RPSAP43-201ENST00000402237 625 ntBASIC18.74■□□□□ 0.59
SPTBN4Q9H254 TOB2P1-201ENST00000469761 992 ntBASIC18.74■□□□□ 0.59
SPTBN4Q9H254 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 AC134684.3-201ENST00000641758 218 ntBASIC18.74■□□□□ 0.59
SPTBN4Q9H254 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 AF238378.1-201ENST00000526806 358 ntBASIC18.74■□□□□ 0.59
SPTBN4Q9H254 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPTBN4Q9H254 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.73■□□□□ 0.59
SPTBN4Q9H254 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 TP73-AS1-207ENST00000624167 988 ntBASIC18.73■□□□□ 0.59
SPTBN4Q9H254 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 AC020928.2-201ENST00000588717 2197 ntBASIC18.73■□□□□ 0.59
SPTBN4Q9H254 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.73■□□□□ 0.59
SPTBN4Q9H254 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 AC093525.10-201ENST00000625130 1569 ntBASIC18.72■□□□□ 0.59
SPTBN4Q9H254 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 HLA-F-220ENST00000434407 884 ntBASIC18.72■□□□□ 0.59
SPTBN4Q9H254 FAM197Y8-203ENST00000450145 560 ntBASIC18.72■□□□□ 0.59
SPTBN4Q9H254 RPL13AP23-201ENST00000480739 586 ntBASIC18.72■□□□□ 0.59
SPTBN4Q9H254 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 AC127496.7-201ENST00000625110 1798 ntBASIC18.72■□□□□ 0.59
SPTBN4Q9H254 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.72■□□□□ 0.59
SPTBN4Q9H254 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 AC034232.1-201ENST00000506026 1064 ntBASIC18.71■□□□□ 0.59
SPTBN4Q9H254 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTBN4Q9H254 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 AKR1C7P-201ENST00000305623 895 ntBASIC18.7■□□□□ 0.58
SPTBN4Q9H254 RPS8P6-201ENST00000426177 609 ntBASIC18.7■□□□□ 0.58
SPTBN4Q9H254 AC139887.3-201ENST00000568585 713 ntBASIC18.7■□□□□ 0.58
SPTBN4Q9H254 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 UPF3AP3-201ENST00000420996 769 ntBASIC18.7■□□□□ 0.58
SPTBN4Q9H254 AC148477.8-201ENST00000624298 468 ntBASIC18.7■□□□□ 0.58
SPTBN4Q9H254 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.7■□□□□ 0.58
SPTBN4Q9H254 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN4Q9H254 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms