Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 AC091304.2-201ENST00000564639 760 ntBASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP3Q9BZ76 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 BX842568.4-201ENST00000421222 227 ntBASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 AC005104.2-201ENST00000427818 678 ntBASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 AC023632.3-201ENST00000521633 145 ntBASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 LINC01711-201ENST00000598340 967 ntBASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP3Q9BZ76 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 KRT18P58-201ENST00000527480 1120 ntBASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 MIR3197-201ENST00000582241 73 ntBASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 AC242852.2-201ENST00000615738 1807 ntBASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP3Q9BZ76 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 C1QL1P1-201ENST00000568105 661 ntBASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 AC131212.4-201ENST00000623606 975 ntBASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNTNAP3Q9BZ76 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 AC140113.2-201ENST00000604370 208 ntBASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3Q9BZ76 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3Q9BZ76 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms