Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.69■□□□□ 0.42
SPENQ96T58 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.69■□□□□ 0.42
SPENQ96T58 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPENQ96T58 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPENQ96T58 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
SPENQ96T58 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SPENQ96T58 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.68■□□□□ 0.42
SPENQ96T58 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.68■□□□□ 0.42
SPENQ96T58 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.68■□□□□ 0.42
SPENQ96T58 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 CCR12P-201ENST00000446203 998 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.68■□□□□ 0.42
SPENQ96T58 KRT8P17-201ENST00000453110 1448 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.68■□□□□ 0.42
SPENQ96T58 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPENQ96T58 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SPENQ96T58 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.68■□□□□ 0.42
SPENQ96T58 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.68■□□□□ 0.42
SPENQ96T58 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.68■□□□□ 0.42
SPENQ96T58 KRT18P16-201ENST00000510337 1294 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.68■□□□□ 0.42
SPENQ96T58 LINC01238-205ENST00000567549 1107 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 AP000692.2-201ENST00000608391 879 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 AL049796.1-201ENST00000565336 1766 ntBASIC17.68■□□□□ 0.42
SPENQ96T58 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.68■□□□□ 0.42
SPENQ96T58 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.67■□□□□ 0.42
SPENQ96T58 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SPENQ96T58 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.67■□□□□ 0.42
SPENQ96T58 AL691432.2-201ENST00000607222 2038 ntBASIC17.67■□□□□ 0.42
SPENQ96T58 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 AL671277.2-201ENST00000458060 996 ntBASIC17.67■□□□□ 0.42
SPENQ96T58 AL691432.3-201ENST00000621860 400 ntBASIC17.67■□□□□ 0.42
SPENQ96T58 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.67■□□□□ 0.42
SPENQ96T58 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.67■□□□□ 0.42
SPENQ96T58 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SPENQ96T58 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
SPENQ96T58 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPENQ96T58 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPENQ96T58 AC092647.4-201ENST00000457211 535 ntBASIC17.67■□□□□ 0.42
SPENQ96T58 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.67■□□□□ 0.42
SPENQ96T58 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.67■□□□□ 0.42
SPENQ96T58 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.67■□□□□ 0.42
SPENQ96T58 AC004263.2-201ENST00000617183 678 ntBASIC17.67■□□□□ 0.42
SPENQ96T58 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SPENQ96T58 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SPENQ96T58 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.66■□□□□ 0.42
SPENQ96T58 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.66■□□□□ 0.42
SPENQ96T58 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.66■□□□□ 0.42
SPENQ96T58 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.66■□□□□ 0.42
SPENQ96T58 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SPENQ96T58 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.66■□□□□ 0.42
SPENQ96T58 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.66■□□□□ 0.42
SPENQ96T58 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SPENQ96T58 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.66■□□□□ 0.42
SPENQ96T58 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPENQ96T58 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.66■□□□□ 0.42
SPENQ96T58 KRT8P10-201ENST00000450021 1447 ntBASIC17.66■□□□□ 0.42
SPENQ96T58 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.66■□□□□ 0.42
SPENQ96T58 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SPENQ96T58 AL441883.1-201ENST00000566170 1045 ntBASIC17.66■□□□□ 0.42
SPENQ96T58 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPENQ96T58 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SPENQ96T58 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPENQ96T58 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.66■□□□□ 0.42
SPENQ96T58 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms