Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 POM121L13P-201ENST00000422362 380 ntBASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
MS4A4EQ96PG1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 AC005332.7-201ENST00000614046 2005 ntBASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MS4A4EQ96PG1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 AP003097.1-201ENST00000530657 1135 ntBASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
MS4A4EQ96PG1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 Z82202.1-201ENST00000623446 1880 ntBASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
MS4A4EQ96PG1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms