Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 AL137060.1-201ENST00000618151 2648 ntBASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 MFAP1P1-201ENST00000442257 1255 ntBASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 MIR3180-1-201ENST00000580374 94 ntBASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 MIR3180-3-201ENST00000584616 94 ntBASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 AP000692.2-201ENST00000608391 879 ntBASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNTNAP3BQ96NU0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 AC092053.2-201ENST00000640557 1818 ntBASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 TSPY19P-201ENST00000418461 509 ntBASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 TSPY18P-201ENST00000441642 509 ntBASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 TSSC2-201ENST00000450217 709 ntBASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
CNTNAP3BQ96NU0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 AC004980.1-204ENST00000429707 299 ntBASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 AL691403.2-201ENST00000618460 490 ntBASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CNTNAP3BQ96NU0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNTNAP3BQ96NU0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP3BQ96NU0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms