Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.69■■□□□ 1.7
PHACTR3Q96KR7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.69■■□□□ 1.7
PHACTR3Q96KR7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.69■■□□□ 1.7
PHACTR3Q96KR7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC25.69■■□□□ 1.7
PHACTR3Q96KR7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.69■■□□□ 1.7
PHACTR3Q96KR7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 CYP2D8P-201ENST00000433633 1490 ntBASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 UNC93B2-201ENST00000285383 730 ntBASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 Z85996.1-201ENST00000494644 937 ntBASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 AC026271.3-201ENST00000571884 352 ntBASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 AC130371.2-201ENST00000619443 611 ntBASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 AC097493.4-201ENST00000641197 219 ntBASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.68■■□□□ 1.7
PHACTR3Q96KR7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 MIR1238-201ENST00000408483 83 ntBASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 AC131212.4-201ENST00000623606 975 ntBASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PHACTR3Q96KR7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 RCC2P6-201ENST00000526625 1557 ntBASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 FITM1-202ENST00000559294 800 ntBASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 FSCN1P1-201ENST00000568912 1481 ntBASIC25.66■■□□□ 1.7
PHACTR3Q96KR7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 AC125437.2-201ENST00000625180 2167 ntBASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PHACTR3Q96KR7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 LINC01023-201ENST00000606054 436 ntBASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PHACTR3Q96KR7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.64■■□□□ 1.69
PHACTR3Q96KR7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.63■■□□□ 1.69
PHACTR3Q96KR7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms