Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 PLK5-205ENST00000642079 1969 ntBASIC16.59■□□□□ 0.25
SPG11Q96JI7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 VENTXP5-201ENST00000523979 775 ntBASIC16.59■□□□□ 0.25
SPG11Q96JI7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 AC139530.3-201ENST00000620344 690 ntBASIC16.59■□□□□ 0.25
SPG11Q96JI7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.59■□□□□ 0.25
SPG11Q96JI7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPG11Q96JI7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.58■□□□□ 0.25
SPG11Q96JI7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
SPG11Q96JI7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPG11Q96JI7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
SPG11Q96JI7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPG11Q96JI7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.58■□□□□ 0.25
SPG11Q96JI7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SPG11Q96JI7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.58■□□□□ 0.24
SPG11Q96JI7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPG11Q96JI7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 PVRIG2P-201ENST00000435460 978 ntBASIC16.57■□□□□ 0.24
SPG11Q96JI7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 CR769767.2-201ENST00000622735 460 ntBASIC16.57■□□□□ 0.24
SPG11Q96JI7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 HLA-A-209ENST00000638375 975 ntBASIC16.57■□□□□ 0.24
SPG11Q96JI7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPG11Q96JI7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 MIR3652-201ENST00000579335 131 ntBASIC16.57■□□□□ 0.24
SPG11Q96JI7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.57■□□□□ 0.24
SPG11Q96JI7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms