Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPGRQ92834 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RPGRQ92834 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.15■■□□□ 1.46
RPGRQ92834 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RPGRQ92834 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.15■■□□□ 1.46
RPGRQ92834 AC011558.1-201ENST00000623459 338 ntBASIC24.15■■□□□ 1.46
RPGRQ92834 AC026310.3-201ENST00000625186 2373 ntBASIC24.15■■□□□ 1.46
RPGRQ92834 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPGRQ92834 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RPGRQ92834 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
RPGRQ92834 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.14■■□□□ 1.46
RPGRQ92834 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RPGRQ92834 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
RPGRQ92834 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RPGRQ92834 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RPGRQ92834 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.14■■□□□ 1.45
RPGRQ92834 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.14■■□□□ 1.45
RPGRQ92834 AL353719.1-201ENST00000566847 864 ntBASIC24.14■■□□□ 1.45
RPGRQ92834 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.45
RPGRQ92834 AL512604.3-201ENST00000569583 964 ntBASIC24.14■■□□□ 1.45
RPGRQ92834 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.14■■□□□ 1.45
RPGRQ92834 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.14■■□□□ 1.45
RPGRQ92834 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.14■■□□□ 1.45
RPGRQ92834 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.14■■□□□ 1.45
RPGRQ92834 AP000550.4-202ENST00000639755 178 ntBASIC24.14■■□□□ 1.45
RPGRQ92834 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
RPGRQ92834 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.13■■□□□ 1.45
RPGRQ92834 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 BX119927.1-201ENST00000636596 1552 ntBASIC24.13■■□□□ 1.45
RPGRQ92834 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.13■■□□□ 1.45
RPGRQ92834 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RPGRQ92834 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.13■■□□□ 1.45
RPGRQ92834 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.13■■□□□ 1.45
RPGRQ92834 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.13■■□□□ 1.45
RPGRQ92834 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RPGRQ92834 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RPGRQ92834 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.13■■□□□ 1.45
RPGRQ92834 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.12■■□□□ 1.45
RPGRQ92834 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.12■■□□□ 1.45
RPGRQ92834 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.12■■□□□ 1.45
RPGRQ92834 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.12■■□□□ 1.45
RPGRQ92834 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.12■■□□□ 1.45
RPGRQ92834 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.12■■□□□ 1.45
RPGRQ92834 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RPGRQ92834 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.11■■□□□ 1.45
RPGRQ92834 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.11■■□□□ 1.45
RPGRQ92834 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.11■■□□□ 1.45
RPGRQ92834 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
RPGRQ92834 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.11■■□□□ 1.45
RPGRQ92834 AL031432.5-201ENST00000641059 760 ntBASIC24.11■■□□□ 1.45
RPGRQ92834 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.11■■□□□ 1.45
RPGRQ92834 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.11■■□□□ 1.45
RPGRQ92834 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RPGRQ92834 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RPGRQ92834 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RPGRQ92834 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.1■■□□□ 1.45
RPGRQ92834 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.1■■□□□ 1.45
RPGRQ92834 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.1■■□□□ 1.45
RPGRQ92834 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.1■■□□□ 1.45
RPGRQ92834 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RPGRQ92834 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.1■■□□□ 1.45
RPGRQ92834 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RPGRQ92834 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RPGRQ92834 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RPGRQ92834 AP001271.2-201ENST00000624018 1556 ntBASIC24.09■■□□□ 1.45
RPGRQ92834 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RPGRQ92834 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RPGRQ92834 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.09■■□□□ 1.45
RPGRQ92834 HOMER2P1-201ENST00000455653 964 ntBASIC24.09■■□□□ 1.45
RPGRQ92834 CA15P1-201ENST00000481698 905 ntBASIC24.09■■□□□ 1.45
RPGRQ92834 KRT18P56-201ENST00000507275 550 ntBASIC24.09■■□□□ 1.45
RPGRQ92834 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.09■■□□□ 1.45
RPGRQ92834 AC140113.3-201ENST00000605663 199 ntBASIC24.09■■□□□ 1.45
RPGRQ92834 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.09■■□□□ 1.45
RPGRQ92834 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms