Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD6Q8TD26 PTBP1P-201ENST00000554374 1601 ntBASIC17.74■□□□□ 0.43
CHD6Q8TD26 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.73■□□□□ 0.43
CHD6Q8TD26 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD6Q8TD26 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD6Q8TD26 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.72■□□□□ 0.43
CHD6Q8TD26 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 AC245100.3-201ENST00000441281 285 ntBASIC17.71■□□□□ 0.43
CHD6Q8TD26 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.71■□□□□ 0.43
CHD6Q8TD26 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHD6Q8TD26 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD6Q8TD26 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHD6Q8TD26 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.42
CHD6Q8TD26 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHD6Q8TD26 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.71■□□□□ 0.42
CHD6Q8TD26 HLA-F-220ENST00000434407 884 ntBASIC17.71■□□□□ 0.42
CHD6Q8TD26 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CHD6Q8TD26 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.71■□□□□ 0.42
CHD6Q8TD26 AC190387.1-201ENST00000551683 408 ntBASIC17.71■□□□□ 0.42
CHD6Q8TD26 AC074051.2-201ENST00000565115 352 ntBASIC17.71■□□□□ 0.42
CHD6Q8TD26 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.71■□□□□ 0.42
CHD6Q8TD26 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD6Q8TD26 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHD6Q8TD26 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.7■□□□□ 0.42
CHD6Q8TD26 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD6Q8TD26 ECEL1P1-201ENST00000373592 1742 ntBASIC17.7■□□□□ 0.42
CHD6Q8TD26 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD6Q8TD26 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms