Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SHKBP1Q8TBC3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHKBP1Q8TBC3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.54■□□□□ 0.88
SHKBP1Q8TBC3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHKBP1Q8TBC3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHKBP1Q8TBC3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 AC005521.1-201ENST00000393351 872 ntBASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHKBP1Q8TBC3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.52■□□□□ 0.88
SHKBP1Q8TBC3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.52■□□□□ 0.87
SHKBP1Q8TBC3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.52■□□□□ 0.87
SHKBP1Q8TBC3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SHKBP1Q8TBC3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 AC004980.1-204ENST00000429707 299 ntBASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 AC011506.1-201ENST00000474329 610 ntBASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 AL445228.2-201ENST00000605589 952 ntBASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.51■□□□□ 0.87
SHKBP1Q8TBC3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 AC113347.1-201ENST00000413321 391 ntBASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 KRT18P22-201ENST00000402024 1347 ntBASIC20.5■□□□□ 0.87
SHKBP1Q8TBC3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 KRT18P57-201ENST00000443599 1254 ntBASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms