Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.07■□□□□ 0.8
RTL3Q8N8U3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL3Q8N8U3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 C1QL1P1-201ENST00000568105 661 ntBASIC20.06■□□□□ 0.8
RTL3Q8N8U3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL3Q8N8U3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 AL158211.5-201ENST00000623583 2518 ntBASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SLC25A24-204ENST00000569674 2357 ntBASIC20.05■□□□□ 0.8
RTL3Q8N8U3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL3Q8N8U3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 UBE2SP1-201ENST00000450587 669 ntBASIC20.04■□□□□ 0.8
RTL3Q8N8U3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL3Q8N8U3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RTL3Q8N8U3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms