Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN22Q8N7P3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 CROCCP5-201ENST00000436658 830 ntBASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN22Q8N7P3 AC005082.1-201ENST00000413042 2259 ntBASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 AL512625.2-201ENST00000417533 625 ntBASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN22Q8N7P3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 AC026185.1-201ENST00000445748 174 ntBASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 AC105036.2-201ENST00000569468 176 ntBASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 AC133552.2-202ENST00000575694 574 ntBASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN22Q8N7P3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN22Q8N7P3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms