Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 GPX1P1-201ENST00000388829 606 ntBASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 AC090340.1-201ENST00000620778 4980 ntBASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 TERF1P5-201ENST00000477545 1207 ntBASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.48■□□□□ 0.71
CRLF3Q8IUI8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 AL121832.2-201ENST00000610979 668 ntBASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 AC087633.2-202ENST00000565166 1439 ntBASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRLF3Q8IUI8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 AL138781.2-201ENST00000617896 1843 ntBASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 AL355802.2-201ENST00000402069 882 ntBASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 AC013268.1-206ENST00000638368 961 ntBASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 AC112229.1-201ENST00000639295 961 ntBASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CRLF3Q8IUI8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 KRT16P6-202ENST00000425692 1426 ntBASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 AC083906.2-201ENST00000511578 360 ntBASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CRLF3Q8IUI8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms