Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 AP000523.1-201ENST00000398242 1049 ntBASIC24.64■■□□□ 1.54
COL23A1Q86Y22 AL160286.2-201ENST00000567150 934 ntBASIC24.64■■□□□ 1.54
COL23A1Q86Y22 AC111152.3-201ENST00000569699 673 ntBASIC24.64■■□□□ 1.54
COL23A1Q86Y22 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL23A1Q86Y22 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.64■■□□□ 1.53
COL23A1Q86Y22 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL23A1Q86Y22 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL23A1Q86Y22 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.63■■□□□ 1.53
COL23A1Q86Y22 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.63■■□□□ 1.53
COL23A1Q86Y22 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 AC233723.2-201ENST00000623798 2106 ntBASIC24.62■■□□□ 1.53
COL23A1Q86Y22 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 NEK4P2-201ENST00000580004 1012 ntBASIC24.62■■□□□ 1.53
COL23A1Q86Y22 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
COL23A1Q86Y22 KRT8P8-201ENST00000434750 1448 ntBASIC24.61■■□□□ 1.53
COL23A1Q86Y22 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 ECEL1P1-201ENST00000373592 1742 ntBASIC24.61■■□□□ 1.53
COL23A1Q86Y22 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL23A1Q86Y22 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 FAAHP1-202ENST00000446499 1238 ntBASIC24.6■■□□□ 1.53
COL23A1Q86Y22 AC009078.2-202ENST00000463353 338 ntBASIC24.6■■□□□ 1.53
COL23A1Q86Y22 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 MIR3180-1-201ENST00000580374 94 ntBASIC24.6■■□□□ 1.53
COL23A1Q86Y22 MIR3180-3-201ENST00000584616 94 ntBASIC24.6■■□□□ 1.53
COL23A1Q86Y22 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL23A1Q86Y22 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 LINC01465-201ENST00000408887 1940 ntBASIC24.59■■□□□ 1.53
COL23A1Q86Y22 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 HBZP1-201ENST00000354915 429 ntBASIC24.59■■□□□ 1.53
COL23A1Q86Y22 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
COL23A1Q86Y22 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms