Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSMD3Q7Z407 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD3Q7Z407 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.65□□□□□ -0.22
CSMD3Q7Z407 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 PRSS44-201ENST00000515154 1146 ntBASIC13.65□□□□□ -0.22
CSMD3Q7Z407 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 NEK4P2-201ENST00000580004 1012 ntBASIC13.65□□□□□ -0.22
CSMD3Q7Z407 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 Z98882.1-201ENST00000622160 2253 ntBASIC13.65□□□□□ -0.22
CSMD3Q7Z407 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 HOMER2P1-201ENST00000455653 964 ntBASIC13.65□□□□□ -0.22
CSMD3Q7Z407 EMBP1-201ENST00000458200 901 ntBASIC13.65□□□□□ -0.22
CSMD3Q7Z407 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSMD3Q7Z407 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.23
CSMD3Q7Z407 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CSMD3Q7Z407 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 AC009078.2-202ENST00000463353 338 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 GCSHP2-201ENST00000560971 527 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 AL732292.2-201ENST00000609649 430 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 UNC93B7-201ENST00000509439 705 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 AC011298.2-201ENST00000617989 482 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 ATP5G2P1-201ENST00000433580 426 ntBASIC13.64□□□□□ -0.23
CSMD3Q7Z407 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD3Q7Z407 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 AC092119.3-201ENST00000612618 583 ntBASIC13.63□□□□□ -0.23
CSMD3Q7Z407 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 HLA-G-202ENST00000376815 851 ntBASIC13.63□□□□□ -0.23
CSMD3Q7Z407 HLA-G-203ENST00000376818 1127 ntBASIC13.63□□□□□ -0.23
CSMD3Q7Z407 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD3Q7Z407 LSR-203ENST00000360798 1963 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD3Q7Z407 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD3Q7Z407 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD3Q7Z407 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD3Q7Z407 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD3Q7Z407 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms