Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 AL355472.2-201ENST00000422958 438 ntBASIC17.98■□□□□ 0.47
TUBA1AQ71U36 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 FAM21FP-204ENST00000608637 956 ntBASIC17.98■□□□□ 0.47
TUBA1AQ71U36 OR10C1-204ENST00000622521 1039 ntBASIC17.98■□□□□ 0.47
TUBA1AQ71U36 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 MKRN4P-201ENST00000444706 1521 ntBASIC17.98■□□□□ 0.47
TUBA1AQ71U36 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TUBA1AQ71U36 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 AL355802.2-201ENST00000402069 882 ntBASIC17.97■□□□□ 0.47
TUBA1AQ71U36 GUSBP6-202ENST00000438529 1198 ntBASIC17.97■□□□□ 0.47
TUBA1AQ71U36 AL162412.1-201ENST00000567129 965 ntBASIC17.97■□□□□ 0.47
TUBA1AQ71U36 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.97■□□□□ 0.47
TUBA1AQ71U36 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 LINC01465-201ENST00000408887 1940 ntBASIC17.96■□□□□ 0.47
TUBA1AQ71U36 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 SLC29A4P1-201ENST00000398760 971 ntBASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 TSPY6P-201ENST00000448518 926 ntBASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 AC010980.2-201ENST00000587099 1412 ntBASIC17.96■□□□□ 0.47
TUBA1AQ71U36 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBA1AQ71U36 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.96■□□□□ 0.46
TUBA1AQ71U36 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TUBA1AQ71U36 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBA1AQ71U36 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms