Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.3■■□□□ 1.8
USP31Q70CQ4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
USP31Q70CQ4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.29■■□□□ 1.8
USP31Q70CQ4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP31Q70CQ4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 CKBP1-201ENST00000565489 1086 ntBASIC26.29■■□□□ 1.8
USP31Q70CQ4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP31Q70CQ4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.29■■□□□ 1.8
USP31Q70CQ4 AC009237.14-201ENST00000609975 1594 ntBASIC26.29■■□□□ 1.8
USP31Q70CQ4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
USP31Q70CQ4 AL512408.1-201ENST00000569378 2000 ntBASIC26.28■■□□□ 1.8
USP31Q70CQ4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP31Q70CQ4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC26.28■■□□□ 1.8
USP31Q70CQ4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP31Q70CQ4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
USP31Q70CQ4 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.28■■□□□ 1.8
USP31Q70CQ4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
USP31Q70CQ4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
USP31Q70CQ4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC26.28■■□□□ 1.8
USP31Q70CQ4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP31Q70CQ4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 RNF152P1-201ENST00000397754 604 ntBASIC26.27■■□□□ 1.8
USP31Q70CQ4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 AC141257.4-201ENST00000634557 245 ntBASIC26.27■■□□□ 1.8
USP31Q70CQ4 AC136944.6-201ENST00000634818 245 ntBASIC26.27■■□□□ 1.8
USP31Q70CQ4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 LINC01465-201ENST00000408887 1940 ntBASIC26.27■■□□□ 1.8
USP31Q70CQ4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.27■■□□□ 1.8
USP31Q70CQ4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC26.26■■□□□ 1.8
USP31Q70CQ4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP31Q70CQ4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP31Q70CQ4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP31Q70CQ4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP31Q70CQ4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP31Q70CQ4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.26■■□□□ 1.79
USP31Q70CQ4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP31Q70CQ4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP31Q70CQ4 AL031133.1-201ENST00000406807 723 ntBASIC26.25■■□□□ 1.79
USP31Q70CQ4 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.25■■□□□ 1.79
USP31Q70CQ4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.25■■□□□ 1.79
USP31Q70CQ4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.25■■□□□ 1.79
USP31Q70CQ4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
USP31Q70CQ4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP31Q70CQ4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP31Q70CQ4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
USP31Q70CQ4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP31Q70CQ4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 COX11P1-201ENST00000489116 835 ntBASIC26.24■■□□□ 1.79
USP31Q70CQ4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 LINC01238-205ENST00000567549 1107 ntBASIC26.24■■□□□ 1.79
USP31Q70CQ4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP31Q70CQ4 AL691432.2-201ENST00000607222 2038 ntBASIC26.24■■□□□ 1.79
USP31Q70CQ4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP31Q70CQ4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.24■■□□□ 1.79
USP31Q70CQ4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP31Q70CQ4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP31Q70CQ4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP31Q70CQ4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP31Q70CQ4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP31Q70CQ4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USP31Q70CQ4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP31Q70CQ4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.23■■□□□ 1.79
USP31Q70CQ4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP31Q70CQ4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC26.22■■□□□ 1.79
USP31Q70CQ4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.22■■□□□ 1.79
USP31Q70CQ4 TSPY5P-201ENST00000426936 936 ntBASIC26.22■■□□□ 1.79
USP31Q70CQ4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP31Q70CQ4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC26.22■■□□□ 1.79
USP31Q70CQ4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.22■■□□□ 1.79
USP31Q70CQ4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms