Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 AC011767.1-201ENST00000617410 1153 ntBASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 AC008694.1-202ENST00000636953 945 ntBASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S3Q6QNY0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S3Q6QNY0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 OR10C1-204ENST00000622521 1039 ntBASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BLOC1S3Q6QNY0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 KRT17P1-201ENST00000399211 1546 ntBASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.6■□□□□ 0.57
BLOC1S3Q6QNY0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms