Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 AC090192.1-201ENST00000517740 490 ntBASIC21.3■■□□□ 1
FOXR2Q6PJQ5 UNC93B5-201ENST00000530315 699 ntBASIC21.3■■□□□ 1
FOXR2Q6PJQ5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
FOXR2Q6PJQ5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 POM121L13P-201ENST00000422362 380 ntBASIC21.29■■□□□ 1
FOXR2Q6PJQ5 TUBB8P6-201ENST00000436895 1288 ntBASIC21.29■■□□□ 1
FOXR2Q6PJQ5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXR2Q6PJQ5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
FOXR2Q6PJQ5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR2Q6PJQ5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXR2Q6PJQ5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXR2Q6PJQ5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.27■□□□□ 0.99
FOXR2Q6PJQ5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.27■□□□□ 0.99
FOXR2Q6PJQ5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXR2Q6PJQ5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms