Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 RN7SL850P-201ENST00000579959 291 ntBASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DCLRE1AQ6PJP8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 CYP2D8P-201ENST00000433633 1490 ntBASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 KRT18P35-201ENST00000510488 1269 ntBASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
DCLRE1AQ6PJP8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 LINC01006-201ENST00000333319 2292 ntBASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.89■□□□□ 0.94
DCLRE1AQ6PJP8 LINC01568-207ENST00000641790 1380 ntBASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 ARMC10P1-201ENST00000313754 855 ntBASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 AC010947.1-201ENST00000623454 693 ntBASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.89■□□□□ 0.93
DCLRE1AQ6PJP8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 AC097488.1-201ENST00000507834 756 ntBASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 AP005242.2-201ENST00000580065 1175 ntBASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 RCC2P6-201ENST00000526625 1557 ntBASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DCLRE1AQ6PJP8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 LINC01521-201ENST00000504184 1943 ntBASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 AC004951.3-201ENST00000418645 1148 ntBASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 AP000692.2-201ENST00000608391 879 ntBASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 AC011298.2-201ENST00000617989 482 ntBASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DCLRE1AQ6PJP8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms