Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 NBPF21P-201ENST00000425093 1451 ntBASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 AC018553.1-201ENST00000616682 1458 ntBASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC39BQ5VTQ0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC39BQ5VTQ0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 TFP1-202ENST00000475455 1573 ntBASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 AC125437.2-201ENST00000625180 2167 ntBASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 AC004264.1-201ENST00000608354 794 ntBASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 AC066615.1-201ENST00000640911 628 ntBASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 AP001271.2-201ENST00000624018 1556 ntBASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TTC39BQ5VTQ0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 KRT16P5-201ENST00000455284 522 ntBASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.33■□□□□ 0.85
TTC39BQ5VTQ0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC39BQ5VTQ0 AP006587.1-201ENST00000534129 1502 ntBASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms