Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC38Q5VT99 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC38Q5VT99 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 KRT8P8-201ENST00000434750 1448 ntBASIC20.28■□□□□ 0.84
LRRC38Q5VT99 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 AC092666.2-201ENST00000613287 246 ntBASIC20.28■□□□□ 0.84
LRRC38Q5VT99 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.28■□□□□ 0.84
LRRC38Q5VT99 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC38Q5VT99 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 AC141586.3-201ENST00000562166 1838 ntBASIC20.27■□□□□ 0.84
LRRC38Q5VT99 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 KRT18P16-201ENST00000510337 1294 ntBASIC20.27■□□□□ 0.84
LRRC38Q5VT99 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
LRRC38Q5VT99 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
LRRC38Q5VT99 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC38Q5VT99 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LRRC38Q5VT99 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.27■□□□□ 0.83
LRRC38Q5VT99 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.27■□□□□ 0.83
LRRC38Q5VT99 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 SOX15-203ENST00000570788 1093 ntBASIC20.26■□□□□ 0.83
LRRC38Q5VT99 AC008687.6-201ENST00000596318 630 ntBASIC20.26■□□□□ 0.83
LRRC38Q5VT99 AC104771.1-201ENST00000603335 964 ntBASIC20.26■□□□□ 0.83
LRRC38Q5VT99 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms