Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
LRRK2Q5S007 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRK2Q5S007 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRK2Q5S007 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRK2Q5S007 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LRRK2Q5S007 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LRRK2Q5S007 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRK2Q5S007 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LRRK2Q5S007 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRK2Q5S007 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRK2Q5S007 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRK2Q5S007 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRK2Q5S007 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 AP003041.3-201ENST00000527151 707 ntBASIC17.02■□□□□ 0.31
LRRK2Q5S007 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LRRK2Q5S007 IL9RP2-201ENST00000423948 1312 ntBASIC17.02■□□□□ 0.31
LRRK2Q5S007 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LRRK2Q5S007 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRK2Q5S007 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRK2Q5S007 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LRRK2Q5S007 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRK2Q5S007 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRK2Q5S007 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.01■□□□□ 0.31
LRRK2Q5S007 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRK2Q5S007 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRK2Q5S007 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRK2Q5S007 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 AL121912.1-201ENST00000603683 238 ntBASIC17.01■□□□□ 0.31
LRRK2Q5S007 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRK2Q5S007 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
LRRK2Q5S007 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17■□□□□ 0.31
LRRK2Q5S007 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17■□□□□ 0.31
LRRK2Q5S007 AC140113.2-201ENST00000604370 208 ntBASIC17■□□□□ 0.31
LRRK2Q5S007 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17■□□□□ 0.31
LRRK2Q5S007 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 TSSC2-201ENST00000450217 709 ntBASIC17■□□□□ 0.31
LRRK2Q5S007 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRK2Q5S007 AC034232.1-201ENST00000506026 1064 ntBASIC17■□□□□ 0.31
LRRK2Q5S007 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRK2Q5S007 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17■□□□□ 0.31
LRRK2Q5S007 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17■□□□□ 0.31
LRRK2Q5S007 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms