Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 KRT17P3-201ENST00000420566 1262 ntBASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 CD99P1-205ENST00000527459 561 ntBASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.27■□□□□ 0.67
CTSL3PQ5NE16 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTSL3PQ5NE16 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
CTSL3PQ5NE16 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTSL3PQ5NE16 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTSL3PQ5NE16 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTSL3PQ5NE16 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSL3PQ5NE16 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 KRT8P8-201ENST00000434750 1448 ntBASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 PRKY-204ENST00000533551 1019 ntBASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 AL032819.2-201ENST00000624543 2162 ntBASIC19.25■□□□□ 0.67
CTSL3PQ5NE16 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 ZNF815P-204ENST00000434898 1737 ntBASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSL3PQ5NE16 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms