Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 MIR4466-201ENST00000606121 54 ntBASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC6LQ2NKX8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 AC105233.4-201ENST00000642045 216 ntBASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC6LQ2NKX8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC6LQ2NKX8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 Z98044.1-201ENST00000632503 1764 ntBASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 AL136116.3-201ENST00000402907 1138 ntBASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 BX842568.3-201ENST00000418104 571 ntBASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC6LQ2NKX8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC6LQ2NKX8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC6LQ2NKX8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ERCC6LQ2NKX8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ERCC6LQ2NKX8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 IGHV3-19-201ENST00000521488 291 ntBASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 AC099398.1-201ENST00000567919 2776 ntBASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC6LQ2NKX8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms