Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MFAP1P1-201ENST00000442257 1255 ntBASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 EGLN1P1-201ENST00000531623 762 ntBASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 WWOX-216ENST00000569818 525 ntBASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 C2orf69P3-201ENST00000565542 1120 ntBASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SHROOM1Q2M3G4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 NTF6B-201ENST00000591913 560 ntBASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SHROOM1Q2M3G4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 FAM207BP-201ENST00000447172 505 ntBASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 AC099778.1-201ENST00000568593 1911 ntBASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 AP001271.2-201ENST00000624018 1556 ntBASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHROOM1Q2M3G4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 AC112907.3-201ENST00000577781 2400 ntBASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 AL590326.2-201ENST00000625139 305 ntBASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 AC096733.2-201ENST00000609937 1394 ntBASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
SHROOM1Q2M3G4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.82■■□□□ 1.24
SHROOM1Q2M3G4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms