Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CFHR3Q02985 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFHR3Q02985 NIFKP9-201ENST00000419265 221 ntBASIC15.3■□□□□ 0.04
CFHR3Q02985 AL596275.1-201ENST00000423464 877 ntBASIC15.3■□□□□ 0.04
CFHR3Q02985 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFHR3Q02985 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.3■□□□□ 0.04
CFHR3Q02985 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
CFHR3Q02985 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFHR3Q02985 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.3■□□□□ 0.04
CFHR3Q02985 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.3■□□□□ 0.04
CFHR3Q02985 AC112907.3-201ENST00000577781 2400 ntBASIC15.3■□□□□ 0.04
CFHR3Q02985 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFHR3Q02985 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFHR3Q02985 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFHR3Q02985 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CFHR3Q02985 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.29■□□□□ 0.04
CFHR3Q02985 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.29■□□□□ 0.04
CFHR3Q02985 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 KRT8P8-201ENST00000434750 1448 ntBASIC15.29■□□□□ 0.04
CFHR3Q02985 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CFHR3Q02985 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.29■□□□□ 0.04
CFHR3Q02985 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CFHR3Q02985 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 AP002982.1-201ENST00000492365 877 ntBASIC15.29■□□□□ 0.04
CFHR3Q02985 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 AC073195.1-201ENST00000607241 877 ntBASIC15.29■□□□□ 0.04
CFHR3Q02985 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.29■□□□□ 0.04
CFHR3Q02985 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFHR3Q02985 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.29■□□□□ 0.04
CFHR3Q02985 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
CFHR3Q02985 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.28■□□□□ 0.04
CFHR3Q02985 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 MIR4497-201ENST00000583208 89 ntBASIC15.28■□□□□ 0.04
CFHR3Q02985 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.28■□□□□ 0.04
CFHR3Q02985 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.28■□□□□ 0.04
CFHR3Q02985 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFHR3Q02985 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.27■□□□□ 0.04
CFHR3Q02985 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.27■□□□□ 0.04
CFHR3Q02985 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.27■□□□□ 0.04
CFHR3Q02985 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.27■□□□□ 0.04
CFHR3Q02985 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 KSR1P1-201ENST00000446298 240 ntBASIC15.27■□□□□ 0.04
CFHR3Q02985 SNORA78-201ENST00000459373 127 ntBASIC15.27■□□□□ 0.04
CFHR3Q02985 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.27■□□□□ 0.04
CFHR3Q02985 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.27■□□□□ 0.04
CFHR3Q02985 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.27■□□□□ 0.04
CFHR3Q02985 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFHR3Q02985 AL445675.2-201ENST00000620291 557 ntBASIC15.27■□□□□ 0.04
CFHR3Q02985 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CFHR3Q02985 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CFHR3Q02985 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CFHR3Q02985 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CFHR3Q02985 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CFHR3Q02985 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms