Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDC42P60953 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.86■□□□□ 0.45
CDC42P60953 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CDC42P60953 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDC42P60953 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CDC42P60953 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CDC42P60953 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.86■□□□□ 0.45
CDC42P60953 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDC42P60953 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDC42P60953 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDC42P60953 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.85■□□□□ 0.45
CDC42P60953 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 AC005082.1-201ENST00000413042 2259 ntBASIC17.85■□□□□ 0.45
CDC42P60953 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CDC42P60953 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.85■□□□□ 0.45
CDC42P60953 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.85■□□□□ 0.45
CDC42P60953 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDC42P60953 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
CDC42P60953 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 PHGDH-210ENST00000641115 1638 ntBASIC17.84■□□□□ 0.45
CDC42P60953 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 AC079598.2-202ENST00000546624 1451 ntBASIC17.84■□□□□ 0.45
CDC42P60953 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 HLA-G-202ENST00000376815 851 ntBASIC17.84■□□□□ 0.45
CDC42P60953 HLA-G-203ENST00000376818 1127 ntBASIC17.84■□□□□ 0.45
CDC42P60953 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.84■□□□□ 0.45
CDC42P60953 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.84■□□□□ 0.45
CDC42P60953 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
CDC42P60953 LETM1P2-201ENST00000597330 2178 ntBASIC17.84■□□□□ 0.45
CDC42P60953 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDC42P60953 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDC42P60953 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC42P60953 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CDC42P60953 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDC42P60953 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CDC42P60953 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.83■□□□□ 0.45
CDC42P60953 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.83■□□□□ 0.45
CDC42P60953 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDC42P60953 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms