Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.16■□□□□ 0.82
EIF3EP60228 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.15■□□□□ 0.82
EIF3EP60228 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
EIF3EP60228 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
EIF3EP60228 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.15■□□□□ 0.82
EIF3EP60228 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.15■□□□□ 0.82
EIF3EP60228 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.15■□□□□ 0.82
EIF3EP60228 MYC-209ENST00000641252 345 ntBASIC20.15■□□□□ 0.82
EIF3EP60228 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 AC092368.3-202ENST00000574180 1591 ntBASIC20.15■□□□□ 0.82
EIF3EP60228 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.15■□□□□ 0.82
EIF3EP60228 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EIF3EP60228 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EIF3EP60228 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
EIF3EP60228 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
EIF3EP60228 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.14■□□□□ 0.81
EIF3EP60228 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.14■□□□□ 0.81
EIF3EP60228 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
EIF3EP60228 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.14■□□□□ 0.81
EIF3EP60228 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
EIF3EP60228 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.14■□□□□ 0.81
EIF3EP60228 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.14■□□□□ 0.81
EIF3EP60228 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.14■□□□□ 0.81
EIF3EP60228 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EIF3EP60228 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.14■□□□□ 0.81
EIF3EP60228 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.13■□□□□ 0.81
EIF3EP60228 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.13■□□□□ 0.81
EIF3EP60228 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 AC120498.9-201ENST00000339021 3867 ntBASIC20.13■□□□□ 0.81
EIF3EP60228 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.13■□□□□ 0.81
EIF3EP60228 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.13■□□□□ 0.81
EIF3EP60228 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.13■□□□□ 0.81
EIF3EP60228 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.13■□□□□ 0.81
EIF3EP60228 AC098934.4-201ENST00000564127 592 ntBASIC20.13■□□□□ 0.81
EIF3EP60228 AL138781.1-201ENST00000566567 1274 ntBASIC20.13■□□□□ 0.81
EIF3EP60228 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.13■□□□□ 0.81
EIF3EP60228 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.13■□□□□ 0.81
EIF3EP60228 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.13■□□□□ 0.81
EIF3EP60228 HLA-B-256ENST00000639848 1089 ntBASIC20.13■□□□□ 0.81
EIF3EP60228 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
EIF3EP60228 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.13■□□□□ 0.81
EIF3EP60228 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
EIF3EP60228 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
EIF3EP60228 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EIF3EP60228 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
EIF3EP60228 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EIF3EP60228 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.12■□□□□ 0.81
EIF3EP60228 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
EIF3EP60228 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms