Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3S2P59780 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.79■□□□□ 0.28
AP3S2P59780 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3S2P59780 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3S2P59780 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3S2P59780 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3S2P59780 PGM5P4-201ENST00000421970 445 ntBASIC16.78■□□□□ 0.28
AP3S2P59780 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3S2P59780 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 AC233992.3-201ENST00000607491 485 ntBASIC16.78■□□□□ 0.28
AP3S2P59780 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3S2P59780 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.78■□□□□ 0.28
AP3S2P59780 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP3S2P59780 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AP3S2P59780 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
AP3S2P59780 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 KRT16P6-202ENST00000425692 1426 ntBASIC16.78■□□□□ 0.28
AP3S2P59780 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S2P59780 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3S2P59780 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP3S2P59780 AC006333.2-201ENST00000607957 2099 ntBASIC16.77■□□□□ 0.28
AP3S2P59780 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
AP3S2P59780 AL161938.1-201ENST00000569833 2180 ntBASIC16.77■□□□□ 0.28
AP3S2P59780 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3S2P59780 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3S2P59780 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S2P59780 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3S2P59780 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
AP3S2P59780 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S2P59780 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S2P59780 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.77■□□□□ 0.27
AP3S2P59780 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.77■□□□□ 0.27
AP3S2P59780 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S2P59780 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S2P59780 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.76■□□□□ 0.27
AP3S2P59780 AC007322.3-201ENST00000426526 701 ntBASIC16.76■□□□□ 0.27
AP3S2P59780 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S2P59780 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.76■□□□□ 0.27
AP3S2P59780 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP3S2P59780 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP3S2P59780 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S2P59780 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 NOC2LP2-201ENST00000407594 1944 ntBASIC16.76■□□□□ 0.27
AP3S2P59780 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP3S2P59780 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3S2P59780 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S2P59780 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3S2P59780 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms