Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN6P56747 AC009947.2-201ENST00000444014 672 ntBASIC18.8■□□□□ 0.6
CLDN6P56747 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN6P56747 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN6P56747 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN6P56747 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN6P56747 AC011558.1-201ENST00000623459 338 ntBASIC18.8■□□□□ 0.6
CLDN6P56747 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN6P56747 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN6P56747 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
CLDN6P56747 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLDN6P56747 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN6P56747 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN6P56747 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN6P56747 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
CLDN6P56747 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.79■□□□□ 0.6
CLDN6P56747 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN6P56747 AP000550.4-202ENST00000639755 178 ntBASIC18.79■□□□□ 0.6
CLDN6P56747 AC116562.4-202ENST00000641738 218 ntBASIC18.79■□□□□ 0.6
CLDN6P56747 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLDN6P56747 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN6P56747 FEM1AP4-201ENST00000443167 1987 ntBASIC18.79■□□□□ 0.6
CLDN6P56747 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN6P56747 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN6P56747 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN6P56747 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN6P56747 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 AC004951.3-201ENST00000418645 1148 ntBASIC18.78■□□□□ 0.6
CLDN6P56747 PCED1CP-201ENST00000419887 785 ntBASIC18.78■□□□□ 0.6
CLDN6P56747 KRT18P48-201ENST00000434763 852 ntBASIC18.78■□□□□ 0.6
CLDN6P56747 AC007663.1-201ENST00000438948 1240 ntBASIC18.78■□□□□ 0.6
CLDN6P56747 DUSP5P1-201ENST00000441325 1139 ntBASIC18.78■□□□□ 0.6
CLDN6P56747 COX11P1-201ENST00000489116 835 ntBASIC18.78■□□□□ 0.6
CLDN6P56747 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.78■□□□□ 0.6
CLDN6P56747 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN6P56747 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN6P56747 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN6P56747 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN6P56747 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLDN6P56747 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN6P56747 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CLDN6P56747 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLDN6P56747 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
CLDN6P56747 FAM207BP-201ENST00000447172 505 ntBASIC18.77■□□□□ 0.6
CLDN6P56747 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLDN6P56747 AL359075.1-203ENST00000462729 1002 ntBASIC18.77■□□□□ 0.6
CLDN6P56747 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN6P56747 FAM86EP-206ENST00000510506 987 ntBASIC18.77■□□□□ 0.6
CLDN6P56747 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN6P56747 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN6P56747 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.77■□□□□ 0.6
CLDN6P56747 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN6P56747 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLDN6P56747 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN6P56747 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms