Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 AL512625.2-201ENST00000417533 625 ntBASIC18.2■□□□□ 0.5
CDH12P55289 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH12P55289 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 LINC01465-201ENST00000408887 1940 ntBASIC18.19■□□□□ 0.5
CDH12P55289 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH12P55289 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 KRT17P1-201ENST00000399211 1546 ntBASIC18.19■□□□□ 0.5
CDH12P55289 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH12P55289 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.19■□□□□ 0.5
CDH12P55289 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH12P55289 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH12P55289 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH12P55289 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CDH12P55289 AC080038.1-201ENST00000611274 1154 ntBASIC18.19■□□□□ 0.5
CDH12P55289 IKBKGP1-201ENST00000612193 1073 ntBASIC18.19■□□□□ 0.5
CDH12P55289 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH12P55289 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH12P55289 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH12P55289 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDH12P55289 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH12P55289 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 C2orf69P4-201ENST00000565394 541 ntBASIC18.18■□□□□ 0.5
CDH12P55289 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.18■□□□□ 0.5
CDH12P55289 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH12P55289 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH12P55289 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH12P55289 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
CDH12P55289 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH12P55289 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.17■□□□□ 0.5
CDH12P55289 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH12P55289 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH12P55289 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH12P55289 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH12P55289 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDH12P55289 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH12P55289 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH12P55289 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms