Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA4P54764 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA4P54764 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA4P54764 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA4P54764 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
EPHA4P54764 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.83■□□□□ 0.61
EPHA4P54764 AL512408.1-201ENST00000569378 2000 ntBASIC18.83■□□□□ 0.61
EPHA4P54764 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA4P54764 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
EPHA4P54764 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHA4P54764 FEM1AP1-201ENST00000431297 1995 ntBASIC18.83■□□□□ 0.61
EPHA4P54764 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHA4P54764 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
EPHA4P54764 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
EPHA4P54764 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.83■□□□□ 0.6
EPHA4P54764 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
EPHA4P54764 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHA4P54764 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EPHA4P54764 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.82■□□□□ 0.6
EPHA4P54764 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EPHA4P54764 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA4P54764 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA4P54764 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA4P54764 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHA4P54764 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHA4P54764 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EPHA4P54764 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHA4P54764 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
EPHA4P54764 KRT8P9-201ENST00000558927 1449 ntBASIC18.82■□□□□ 0.6
EPHA4P54764 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHA4P54764 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EPHA4P54764 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.81■□□□□ 0.6
EPHA4P54764 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.81■□□□□ 0.6
EPHA4P54764 AL390955.1-201ENST00000428694 934 ntBASIC18.81■□□□□ 0.6
EPHA4P54764 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EPHA4P54764 AC011506.1-201ENST00000474329 610 ntBASIC18.81■□□□□ 0.6
EPHA4P54764 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EPHA4P54764 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.81■□□□□ 0.6
EPHA4P54764 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.81■□□□□ 0.6
EPHA4P54764 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA4P54764 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EPHA4P54764 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
EPHA4P54764 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
EPHA4P54764 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.8■□□□□ 0.6
EPHA4P54764 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHA4P54764 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA4P54764 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EPHA4P54764 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA4P54764 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.8■□□□□ 0.6
EPHA4P54764 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.8■□□□□ 0.6
EPHA4P54764 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
EPHA4P54764 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.8■□□□□ 0.6
EPHA4P54764 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EPHA4P54764 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 RCC2P6-201ENST00000526625 1557 ntBASIC18.8■□□□□ 0.6
EPHA4P54764 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
EPHA4P54764 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EPHA4P54764 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA4P54764 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA4P54764 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA4P54764 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA4P54764 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA4P54764 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA4P54764 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms