Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PDE6CP51160 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE6CP51160 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 AIRN-201ENST00000601203 4374 ntBASIC21.1■□□□□ 0.97
PDE6CP51160 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE6CP51160 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PDE6CP51160 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE6CP51160 RPPH1-201ENST00000516869 333 ntBASIC21.1■□□□□ 0.97
PDE6CP51160 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.1■□□□□ 0.97
PDE6CP51160 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE6CP51160 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE6CP51160 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
PDE6CP51160 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDE6CP51160 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6CP51160 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE6CP51160 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE6CP51160 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.09■□□□□ 0.97
PDE6CP51160 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.09■□□□□ 0.97
PDE6CP51160 AC120498.8-201ENST00000614275 531 ntBASIC21.09■□□□□ 0.97
PDE6CP51160 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.09■□□□□ 0.97
PDE6CP51160 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.09■□□□□ 0.97
PDE6CP51160 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE6CP51160 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDE6CP51160 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE6CP51160 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6CP51160 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE6CP51160 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6CP51160 AC018553.1-201ENST00000616682 1458 ntBASIC21.08■□□□□ 0.97
PDE6CP51160 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 MIR718-201ENST00000390190 70 ntBASIC21.08■□□□□ 0.97
PDE6CP51160 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6CP51160 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6CP51160 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PDE6CP51160 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6CP51160 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6CP51160 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.08■□□□□ 0.97
PDE6CP51160 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6CP51160 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.08■□□□□ 0.97
PDE6CP51160 AC116351.2-201ENST00000606540 1585 ntBASIC21.08■□□□□ 0.97
PDE6CP51160 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.08■□□□□ 0.96
PDE6CP51160 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PDE6CP51160 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.08■□□□□ 0.96
PDE6CP51160 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6CP51160 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PDE6CP51160 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6CP51160 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6CP51160 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDE6CP51160 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.07■□□□□ 0.96
PDE6CP51160 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.07■□□□□ 0.96
PDE6CP51160 RPS2P4-201ENST00000476944 856 ntBASIC21.07■□□□□ 0.96
PDE6CP51160 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.07■□□□□ 0.96
PDE6CP51160 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
PDE6CP51160 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.07■□□□□ 0.96
PDE6CP51160 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6CP51160 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6CP51160 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms