Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB28P51157 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.91■□□□□ 0.62
RAB28P51157 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.91■□□□□ 0.62
RAB28P51157 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RAB28P51157 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB28P51157 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB28P51157 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAB28P51157 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RAB28P51157 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB28P51157 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB28P51157 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 AC012618.2-201ENST00000428058 849 ntBASIC18.9■□□□□ 0.62
RAB28P51157 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB28P51157 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB28P51157 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 AL353708.3-201ENST00000610272 989 ntBASIC18.9■□□□□ 0.62
RAB28P51157 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB28P51157 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB28P51157 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB28P51157 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB28P51157 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB28P51157 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB28P51157 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB28P51157 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB28P51157 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB28P51157 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB28P51157 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RAB28P51157 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RAB28P51157 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RAB28P51157 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB28P51157 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAB28P51157 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 RPS2P55-201ENST00000397318 883 ntBASIC18.89■□□□□ 0.61
RAB28P51157 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RAB28P51157 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RAB28P51157 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 AP002982.1-201ENST00000492365 877 ntBASIC18.89■□□□□ 0.61
RAB28P51157 AC107956.1-201ENST00000494359 873 ntBASIC18.89■□□□□ 0.61
RAB28P51157 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.89■□□□□ 0.61
RAB28P51157 AC093827.2-201ENST00000512654 315 ntBASIC18.89■□□□□ 0.61
RAB28P51157 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB28P51157 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB28P51157 AF186192.3-201ENST00000583427 947 ntBASIC18.89■□□□□ 0.61
RAB28P51157 AC233702.5-201ENST00000584107 538 ntBASIC18.89■□□□□ 0.61
RAB28P51157 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB28P51157 AP001412.1-201ENST00000608405 714 ntBASIC18.89■□□□□ 0.61
RAB28P51157 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB28P51157 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB28P51157 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB28P51157 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB28P51157 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB28P51157 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB28P51157 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB28P51157 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RAB28P51157 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB28P51157 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB28P51157 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB28P51157 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
RAB28P51157 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB28P51157 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB28P51157 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB28P51157 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms