Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC6A12P48065 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.88■□□□□ 0.61
SLC6A12P48065 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC6A12P48065 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC6A12P48065 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 AC069544.1-201ENST00000609399 999 ntBASIC18.88■□□□□ 0.61
SLC6A12P48065 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC6A12P48065 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A12P48065 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC6A12P48065 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC6A12P48065 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SLC6A12P48065 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC6A12P48065 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 AC233263.1-201ENST00000578059 224 ntBASIC18.87■□□□□ 0.61
SLC6A12P48065 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC6A12P48065 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A12P48065 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC6A12P48065 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A12P48065 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A12P48065 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A12P48065 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC6A12P48065 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 TUBB8P6-201ENST00000436895 1288 ntBASIC18.86■□□□□ 0.61
SLC6A12P48065 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC6A12P48065 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC6A12P48065 MTDHP1-201ENST00000605323 784 ntBASIC18.86■□□□□ 0.61
SLC6A12P48065 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC6A12P48065 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC6A12P48065 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A12P48065 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC6A12P48065 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SLC6A12P48065 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SLC6A12P48065 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A12P48065 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC6A12P48065 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC6A12P48065 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SLC6A12P48065 KRT17P3-201ENST00000420566 1262 ntBASIC18.85■□□□□ 0.61
SLC6A12P48065 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SLC6A12P48065 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC6A12P48065 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A12P48065 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 PRKY-204ENST00000533551 1019 ntBASIC18.85■□□□□ 0.61
SLC6A12P48065 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A12P48065 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
SLC6A12P48065 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC6A12P48065 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SLC6A12P48065 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A12P48065 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC6A12P48065 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms