Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF9P41273 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
TNFSF9P41273 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
TNFSF9P41273 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF9P41273 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF9P41273 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.2■□□□□ 0.98
TNFSF9P41273 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.2■□□□□ 0.98
TNFSF9P41273 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF9P41273 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.2■□□□□ 0.98
TNFSF9P41273 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.2■□□□□ 0.98
TNFSF9P41273 CD177P1-201ENST00000606252 935 ntBASIC21.2■□□□□ 0.98
TNFSF9P41273 AC073195.1-201ENST00000607241 877 ntBASIC21.2■□□□□ 0.98
TNFSF9P41273 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF9P41273 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF9P41273 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TNFSF9P41273 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.2■□□□□ 0.98
TNFSF9P41273 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TNFSF9P41273 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.19■□□□□ 0.98
TNFSF9P41273 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.19■□□□□ 0.98
TNFSF9P41273 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TNFSF9P41273 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TNFSF9P41273 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.19■□□□□ 0.98
TNFSF9P41273 CR392000.1-201ENST00000624770 1228 ntBASIC21.19■□□□□ 0.98
TNFSF9P41273 HLA-A-209ENST00000638375 975 ntBASIC21.19■□□□□ 0.98
TNFSF9P41273 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TNFSF9P41273 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFSF9P41273 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF9P41273 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.18■□□□□ 0.98
TNFSF9P41273 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TNFSF9P41273 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TNFSF9P41273 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFSF9P41273 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 AP001412.1-201ENST00000608405 714 ntBASIC21.18■□□□□ 0.98
TNFSF9P41273 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFSF9P41273 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF9P41273 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFSF9P41273 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TNFSF9P41273 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.17■□□□□ 0.98
TNFSF9P41273 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFSF9P41273 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.17■□□□□ 0.98
TNFSF9P41273 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TNFSF9P41273 LINC01465-201ENST00000408887 1940 ntBASIC21.17■□□□□ 0.98
TNFSF9P41273 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TNFSF9P41273 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.17■□□□□ 0.98
TNFSF9P41273 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF9P41273 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TNFSF9P41273 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 KSR1P1-201ENST00000446298 240 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms