Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 BX119927.1-201ENST00000636596 1552 ntBASIC17.88■□□□□ 0.45
RFC3P40938 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.88■□□□□ 0.45
RFC3P40938 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 NUDT16P1-203ENST00000513809 620 ntBASIC17.88■□□□□ 0.45
RFC3P40938 KRT18P21-201ENST00000515767 1272 ntBASIC17.88■□□□□ 0.45
RFC3P40938 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.88■□□□□ 0.45
RFC3P40938 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.88■□□□□ 0.45
RFC3P40938 REXO1L10P-201ENST00000615707 1290 ntBASIC17.88■□□□□ 0.45
RFC3P40938 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.88■□□□□ 0.45
RFC3P40938 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RFC3P40938 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RFC3P40938 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.88■□□□□ 0.45
RFC3P40938 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.88■□□□□ 0.45
RFC3P40938 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFC3P40938 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RFC3P40938 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RFC3P40938 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.87■□□□□ 0.45
RFC3P40938 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.87■□□□□ 0.45
RFC3P40938 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RFC3P40938 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RFC3P40938 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.87■□□□□ 0.45
RFC3P40938 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.87■□□□□ 0.45
RFC3P40938 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.87■□□□□ 0.45
RFC3P40938 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.87■□□□□ 0.45
RFC3P40938 AP000525.1-201ENST00000608286 694 ntBASIC17.87■□□□□ 0.45
RFC3P40938 AL353708.3-201ENST00000610272 989 ntBASIC17.87■□□□□ 0.45
RFC3P40938 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.87■□□□□ 0.45
RFC3P40938 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.87■□□□□ 0.45
RFC3P40938 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.87■□□□□ 0.45
RFC3P40938 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 KRT16P1-201ENST00000399124 1418 ntBASIC17.87■□□□□ 0.45
RFC3P40938 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFC3P40938 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.86■□□□□ 0.45
RFC3P40938 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.86■□□□□ 0.45
RFC3P40938 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.86■□□□□ 0.45
RFC3P40938 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.86■□□□□ 0.45
RFC3P40938 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RFC3P40938 YBX1P10-201ENST00000444752 975 ntBASIC17.86■□□□□ 0.45
RFC3P40938 KSR1P1-201ENST00000446298 240 ntBASIC17.86■□□□□ 0.45
RFC3P40938 RBM17P1-201ENST00000453646 1190 ntBASIC17.86■□□□□ 0.45
RFC3P40938 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.86■□□□□ 0.45
RFC3P40938 C1QL1P1-201ENST00000568105 661 ntBASIC17.86■□□□□ 0.45
RFC3P40938 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RFC3P40938 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.86■□□□□ 0.45
RFC3P40938 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RFC3P40938 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.86■□□□□ 0.45
RFC3P40938 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RFC3P40938 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFC3P40938 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFC3P40938 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RFC3P40938 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.85■□□□□ 0.45
RFC3P40938 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.85■□□□□ 0.45
RFC3P40938 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.85■□□□□ 0.45
RFC3P40938 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 AL390955.1-201ENST00000428694 934 ntBASIC17.85■□□□□ 0.45
RFC3P40938 TUBB8P6-201ENST00000436895 1288 ntBASIC17.85■□□□□ 0.45
RFC3P40938 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.85■□□□□ 0.45
RFC3P40938 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.85■□□□□ 0.45
RFC3P40938 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms